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Meet the Microbiologist

Meet the Microbiologist is a podcast that showcases the people behind the scientific discoveries. Each guest introduces their research in one of the cutting-edge areas of the microbial sciences: genomics, antibiotic resistance, synthetic biology, emerging infectious diseases, microbial ecology, public health, probiotics, and more! You no longer have to suffer in silence: learn about epidemiology as you run errands, explore drug discovery as you drive home, delve into microbial genomics at the gym. Each guest discusses their scientific discoveries and where future technologies may lead. Meet the Microbiologist, hosted by Julie Wolf, was previously titled Meet the Scientist, hosted by Merry Buckley and Carl Zimmer.

Wednesday, 18 February 2009 15:54

MTS11 - Daniel Lew - The Yeast Cell Cycle

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Daniel Lew is a professor of Pharmacology and Cancer Biology and of Genetics at the Duke University Medical Center in Durham, North Carolina.  His research program focuses on cell cycle control in yeast, and how the cell cycle interacts with cell polarity.

Yeast cells may look simple, but inside every little single-cell package lurks an intricate creature that senses and responds cunningly to its surroundings.  Dr. Lew has uncovered many of the secrets of the tiny yeast, and since yeast bear a striking resemblance to human cells, some of these facts could help us eventually conquer our own problems with the cell cycle, including cancer – a kind of cell division gone wild.

In this interview, I talk with Dr. Lew about how a yeast cell knows when to say “when” during budding, why he studies yeast at a medical school, and where his hard-to-discern accent really comes from (hint: it’s not a North Carolina accent).

Direct download: MTS11

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Tony Maurelli is a professor of microbiology and immunology in the F. Edward Hébert School of Medicine at the Uniformed Services University of the Health Sciences in Bethesda, Maryland.  Dr. Maurelli’s major research interest lies in the genetics of bacterial pathogenesis – the genetic nuts and bolts of how bacteria infect humans and make us sick.

Dr. Maurelli’s work has uncovered “antivirulence genes” in Shigella flexneri, a major cause of dysentery and food borne illness.  This is an interesting concept: antivirulence genes undermine pathogenicity, so they must be broken or dropped from the genome for a bacterium to take good advantage of a host and cause disease.  These genes are a hindrance, so to become an effective pathogen, Shigella must stop using them.

In this interview, I talked with Dr. Maurelli about antivirulence genes, about whether the naming system for bacteria should be fixed, and about his favorite bacteria.

Direct download: MTS10

Wednesday, 18 February 2009 15:27

Stanley Falkow - 21st Century Microbe Hunter

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Dr. Falkow talks about his prescient concerns about the dangers of using antibiotics as growth promoters in livestock, why Salmonella is so good at making you sick, and why students who are interested in science should follow their passion.

Wednesday, 18 February 2009 10:00

MTS008 - Rachel Whitaker - The Evolution of Sulfolobus

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whitakerRachel Whitaker is an assistant professor of microbiology at the University of Illinois at Urbana-Champaign, where she has developed a research program focused on the evolutionary ecology of microorganisms. Much of Dr. Whitaker’s work centers around a hyperthermophile found in geothermal springs: the archaeon Sulfolobus islandicus.

Evolution is not just history – it’s still in action today, molding humans, plants, animals and, of course, microbes, in ways we still don’t completely understand. One of Whitaker’s focus areas is archaea, a group of single-celled microbes that are found in some of the harshest environments on earth. By looking at how one variety of archaea, Sulfolobus, varies from place to place, Whitaker hopes to find whether Sulfolobus is adapting new characteristics to suit its habitats, and whether this kind of adaptation can help us explain why there are so many different kinds of microbes in the world.

In this interview, I asked Dr. Whitaker about the hot springs where she studies Sulfolobus, whether it’s hard to communicate with ecologists who work with bigger organisms, and about new discoveries she’s made related to an immune system in archaea.

Direct download: MTS8

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Dr. Anthony Fauci is the director of NIAID – the National Institutes for Allergy and Infectious Disease – where he is also Chief of the Laboratory of Immunoregulation. Dr. Fauci’s research interests lie primarily in the molecular mechanisms of HIV and AIDS, and he has published extensively on the interactions of HIV with the immune system. He’ll be speaking at the opening session of ICAAC – the Interscience Conference on Antimicrobial Agents and Chemotherapy – on October 25 in Washington DC, where he’ll describe some of the remaining challenges in the fight against HIV, tuberculosis, and antibiotic resistant microbes.

Dr. Fauci is not only a researcher, he is also an important player in science policy in the U.S. He was a primary architect of PEPFAR, the President’s Emergency Plan for AIDS Relief, a program that received reauthorization and has a budget of $48 billion for HIV/AIDS, tuberculosis, and malaria around the world. In honor of his efforts to improve our understanding and treatment of HIV and AIDS, Dr. Fauci was recently awarded the Presidential Medal of Freedom, the nation’s highest civil award.

In this interview, I talked with Dr. Fauci about progress in managing infectious disease on a global scale, why it’s the “devil you don’t know” that is still the scariest infectious disease of all, and about the roles of abstinence education and condom awareness in PEPFAR.

Direct download: MTS7

Bruce Rittmann

Bruce Rittmann, the Director of the Center for Environmental Biotechnology at the Biodesign Institute of Arizona State, focuses his efforts on reclaiming contaminated water and producing renewable energy using microbes.

He was elected to the National Academy of Engineering in 2004 and credited with pioneering development of biofilm fundamentals and contributing to their widespread use in the bioremediation of contaminated ecosystems. His research combines many disciplines of science, including engineering, microbiology, biochemistry, geochemistry and microbial ecology. Formerly with Northwestern University, Rittmann is also a leader in the development of the Membrane Biofilm Reactor, an approach that uses bacteria to destroy pollutants in water. The Membrane Biofilm Reactor is especially effective for removing perchlorate from drinking water, and it is being launched commercially.

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In this podcast, I talk with Dr. Rittmann about the biofilm reactor process, the electricity hiding in our wastewater, and how we may some day grow fuel on the roofs of buildings.

Direct download: MTS6

Tuesday, 17 February 2009 14:50

MTS005 - Brett Finlay - E.coli and the Human Gut

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Brett Finlay

Brett Finlay is a professor in the Michael Smith Laboratories, and the Departments of Biochemistry and Molecular Biology, and Microbiology and Immunology at the University of British Columbia.

His research program focuses on E. coli, how it interacts with the cells of the human gut, and mouse models of E. coli-like infections.  Dr. Finlay will speak at the conference on Beneficial Microbes in San Diego this October, where he’ll describe the results of some of his latest research, which examines how E. coli infections effect the microbes that live in our guts.

Sadly, outbreaks of Escherichia coli infections in this country are common – just this summer a huge E. coli outbreak in Oklahoma sickened nearly 300 people and sent 67 of them to the hospital.  Clearly, in an outbreak, not everyone is effected equally.  When lots of people are exposed to E. coli, why do some of those people walk away unharmed while others wind up in the I.C.U.?  Dr. Finlay would say part of the answer, at least, probably lies in which microbes live in our intestine.

In this podcast, I talked with Dr. Finlay about why we have so many different kinds of microbes in our guts, what happens to them when E. coli strikes, and why we have a long way to go before probiotics offer help – and not just hope.

Direct download: MTS5

Tuesday, 17 February 2009 14:14

MTS004 - David Relman - The Human Microbiome

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David Relman

David Relman is a Professor of Medicine and of Microbiology & Immunology at Stanford University, and his research program focuses on the human microbiome – the microbial communities of bacteria, viruses, and other organisms that thrive on and in the human body. He’ll be speaking at ASM’s conference on Beneficial Microbes in San Diego this October, where he’ll talk about our personal microbial ecosystems, how far we’ve come in research and how far we have to go.

Since Louis Pasteur first deduced that microbes are to blame for infectious disease, doctors and scientists alike have mostly seen infection as warfare between a pathogen and the human body. Dr. Relman sees things a little differently. To him, the complex communities of microbes that line our skin, mouths, intestines, and other orifices (ahem) are also involved in this battle, interacting with pathogens and with our bodies, and these interactions help determine how a fracas plays out.

In this interview, I asked Dr. Relman about our personal ecosystems of microbes, whether we’ll ever be able to understand and predict what these communities do, and about the sometimes distressing effects of oral antibiotics on our guts. We also talked about whether being MTV’s Rock Doctor back in the 1990’s had an impact on his other professional pursuits.

Direct download: MTS4

Tuesday, 17 February 2009 13:38

MTS003 - Ute Hentschel - Symbiotic Sea Sponges

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Ute Hentschel Ute Hentschel is a professor of chemical ecology at the University of Würzburg in Germany. Her research focuses on characterizing the microbial communities associated with marine sponges, the diversity of these symbionts and their activities.

On this episode, I talk with Ute Hentschel about her research on the microbes that live on and in sea sponges – those squishy, colorful residents of coral reefs

Dr. Hentschel describes some of the utterly unique microbes that are only found in sponges, what those microbes get from living in a sponge hotel, and why it’s nice to have a study site in the Bahamas.

Direct dowload: MTS3

Tuesday, 17 February 2009 12:28

MTS002 - Seth Darst - RNA polymerase

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Seth Darst Seth Darst is a professor of Molecular Biophysics at the Rockefeller University in New York city, where his research centers on RNA polymerase, the enzyme at the heart of a cell’s ability to make protein from a set of DNA instructions.

In this interview, I talk with Dr. Darst about how he got his start in research, whether computers will eventually be able to predict complex protein structures, and why eager young scientists shouldn’t miss their chance at postdoctoral training.

Direct download: MTS2

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